The Cellular Landscape Of Mid‐size Noncoding RNA
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Progress and prospects of noncoding RNAs in insects
by M LI 2019 Cited by 10 2009; Krol et al. 2010). miRNA widely exists in almost all multicellular organisms and was the first identified small silencing RNA of the length 18 22 nt.
The landscape of mitochondrial small non-coding RNAs in the
by E Larriba 2018 Cited by 15 Keywords: Small non-coding RNA, Mitochondria, Primordial germ cells, Gametes, Zygotes majority are found in compact circular DNA (1.6 Kb) in-.
Exploring the Structure of Long Non-Coding RNAs - Los
bryonic stem cell pluripotency,30 brain function,31 34 structured isolated RNA with a compact core.48 (b) The ribosome, solved by Gao et al.,
A Landscape of Murine Long Non-Coding RNAs Reveals the
by Q Zhou 2020 Cited by 7 This study serves as a valuable resource for further studies on lncRNAs during aging. Zhou et al., 2020, Cell Reports 31, 107694. May 26, 2020 © 16 pages
The long noncoding RNA ASNR regulates degradation of Bcl
by J Chen Cited by 13 The large amounts of non-coding RNAs scale consistent with proportion of AUF1 which targets the B-cell lymphoma-2 (Bcl-2) mRNA.
Long non-coding RNAs in B-cell malignancies: a - Oncotarget
Keywords: long non-coding RNAs; B-cell differentiation; B-cell and reproduction in any medium, provided the original author and source are credited.
The Emerging Landscape of Long Non-Coding RNAs in
by Z Liao 2021 Cited by 2 High CCAT2 expression is closely associated with poor cell differentiation and depth of tumor invasion, lymph node metastasis, distant
Long non-coding regulatory RNAs in sponges and insights
by F Gaiti 2018 Cited by 11 animals; long non-coding. RNAs; multicellularity; histone modifications; cis-regulation; enhancers. Multicellular life has evolved
Interplay between long non-coding RNAs and epigenetic
by DJ Hanly 2018 Cited by 66 our increasing knowledge of their role in development and cellular differen- below 40 bp, through mid-sized snoRNAs (60 300 bp) and enhancer RNAs.
Remodeling of Stromal Cells and Immune Landscape in
by L Arora 2021 Keywords: tumor microenvironment, stromal cell, immune cell, tumor progression, non coding RNAs. INTRODUCTION.
Integrative Genome-Wide Analysis of Long Noncoding RNAs
1 Aug 2018 changes to the noncoding transcriptional landscape of distinct immune cell classes, thus providing cell type-specific guidance.
Profiles of Long Noncoding RNAs in Human Naive and
by CF Spurlock 2017 Cited by 22 Lineage-specific novel lncRNA loci are transcribed 1 in at least one cell lineage; middle panel, average expression levels of the
A long noncoding RNA, LncMyoD, modulates - PNAS
by A Dong 2020 Cited by 4 stem cell lncRNA chromatin modulation lineage progression TFs access compact chromatin during lineage commitment, and the.
Transcriptional Landscape of Pathogen-responsive Lncrnas
Background: Long non-coding RNAs (lncRNAs) produced by the plant genome are Generally, transcript with no protein-coding ability and length > 200bp is
Identification of long non-coding RNAs in insects - HAL-Inria
by F Legeai 2015 Cited by 34 of protein-coding genes localized in the Hox cluster . Similarly, Li et al. recently observed that some ncRNAs of intermediate sizes are
Functional classification of long non-coding RNAs by k-mer
by JM Kirk Cited by 101 of which regulate fundamental cellular processes. Still, the K-mer counts for each lncRNA are then normalized by lncRNA length.
Noncoding RNAs - Keystone Symposia
Protein-RNA Interactions: Scale, Mechanisms, Structure and Function of Coding and fabric of noncoding RNA regulation and form and function in the cell;
The medium-size noncoding RNA transcriptome of
by L Bousquet 2020 (2015) The emerging landscape of small nucleolar RNAs in cell biology. Wiley Interdiscip. Rev. 6, 381 397. 13. Falaleeva,M., Welden,J.R., Duncan 13 pages
The long non-coding RNA landscape of periodontal ligament
by Y Huang 2019 Cited by 15 (a) Left: cell morphology images of PDLSCs with or without compressive force for 12 hours. Scale bar,. 200 μm. Right: relative cell growth of these PDLSCs. (b)
lncRNA Epigenetic Landscape Analysis Identifies EPIC1 as
by Z Wang Cited by 249 We characterized the epigenetic landscape of genes encoding long noncoding RNAs (lncRNAs) across 6,475 tumors and 455 cancer cell lines.
Single-cell Long Non-coding RNA Landscape of T - bioRxiv
by H Luo 2020 from the bulk-seq method (average 48,854 transcripts) (Figure 1B). 125. According to the cell-type pooling strategy, the cells from all patients
Noncoding RNAs in Cancer Development - Annual Reviews
by CP Lin 2017 Cited by 32 transcriptional landscape of the human genome extends well beyond transcription initiation RNAs (tiRNAs); the mid-size ncRNAs
The noncoding and coding transcriptional landscape of the
by H Tang 2020 Cited by 18 et al. to characterize noncoding RNA functions in different cell types. long ncRNAs (lncRNAs), based upon their size.8 This.
Decoding the Long Noncoding RNA During Cardiac Maturation
by M Touma 2016 Cited by 34 plex cellular differentiation, proliferation, migration, and expression profiles of the long noncoding RNAs (lncRNAs) are not fully elucidated.
Long noncoding RNAs - Endocrine-Related Cancer
by AK Murugan 2018 Cited by 91 Based on cellular function,. lncRNAs could also be classified broadly into oncogenic and tumor-suppressive lncRNAs in a way similar to the protein-coding genes.
Analysis of Differentially Expressed Long Noncoding RNA in
by F Liu 2020 The cell hypoxia model was used to detect the expression of the candidate lncRNA. Results: Of the 45,923 lncRNA transcripts.
Long noncoding RNAs in hematopoiesis[version 1; peer
by X Zhang 2016 Cited by 5 are longer than 200 nucleotides in length, and though structurally Long noncoding RNAs in hematopoietic stem cell.
Genome-wide identification and characterization of - Nature
by A Sulayman 2019 Cited by 14 Long non-coding RNAs (lncRNAs), >200 nt in length, are transcribed from and the developmental processes at the cellular level are reasonably well
PDF(0) - Bioscience Research Institute
by MB Khawar 2018 Cited by 4 extensively studied class of noncoding RNAs (ncRNAs) snoRNAs are of intermediate size comprising from 60 to 300 bps. Except these mammalian also possess.8 pages
Transcriptional Landscape and Regulatory Roles of Small
by DR Gelsinger Cited by 30 cover the functions of small regulatory noncoding RNAs (sRNAs) in gene from 49 to 1,000 nt in size and with an average length of 373 nt.
The long non-coding RNA landscape in juvenile
by M Hofmans 2018 Cited by 10 hematopoietic stem cell transplantation (HSCT) is the Long non-coding RNA transcriptome in juvenile myelomonocytic leukemia (JMML).
RNA regulatory networks in animals and plants - Gene
by Y Bai Cited by 54 The evolutionary rate of protein-coding genes shows a universal negative correlation with expres- sion: highly expressed genes are, on average,
ATP-dependent chromatin remodeling shapes the long
by EA Alcid 2014 Cited by 47 shapes the long noncoding RNA landscape scale. The black lines represent the average signals, and the colored lines represent the RNA signals of the top 13 pages
Single-Cell Profiling of Coding and Noncoding Genes - MDPI
by F Nilsson 2021 Cited by 1 the expression of lncRNA and obtained a single-cell landscape of these Lam-111-coated plates (1 µg/cm2) in B27 medium with BDNF
Epigenetic Landscape Analysis of the Long Non-Coding RNA
by L Jiang 2021 Moreover, after Bc037156 siRNA treated, expression levels of IL-1β and Srgn were significantly downregulated in the three cell lines.11 pages
Long Noncoding RNA LINC00460 Promotes Cell Progression
by M Li 2020 Cited by 8 For transwell migration assay, CAL-27 or WSU-HN4 cells. (6 Â 104) after transfected 24 h were plated in a total volume of 200 ml serum-free medium on the upper
A landscape of circular RNA expression in the - A*STAR
by WLW Tan 2017 Cited by 183 between linear protein coding or non-coding gene expression and their corresponding circRNA expression. Heatmap shows the average expression of lin-.12 pages
The cellular landscape of midâ 'size noncoding RNA - Wiley
by V Boivin 2019 Cited by 12 The production of these embedded mid-size RNAs not only requires host gene transcription by the RNA polymerase II, but also splicing of the
The role of long non-coding RNAs in neurodevelopment, brain
by TC Roberts 2014 Cited by 159 Firstly,. lncRNA genes are expressed in a tissue-specific manner. Investigation of the transcriptional landscape of multiple human cell lines found that 29%
Non-Coding RNA Signatures of B-Cell Acute - MDPI
by PD Rodriguez 2021 4. Long Non-Coding RNAs in Progenitor B-Cell Acute Lymphoblastic Leukemia. Several large-scale transcriptomic studies have described global
Noncoding RNAs implication in cardiovascular diseases in the
by S Greco 2020 Cited by 3 discuss the potential role of noncoding RNAs in COVID-19 disease mechanisms and the immune cell landscape of two severe-stage COVID-.
Understanding Long Noncoding RNAs through - Cell Press
by J Carlevaro-Fita 2019 Cited by 101 that the average lncRNA has greater nuclear concentration across all approaches, promising to rapidly improve the volume and quality.
A Comprehensive Analysis of Cell Type Specific Nuclear
by AS Reddy 2017 Cited by 34 Recent characterization of the transcriptional landscape of cell lines RNAs in the brain, including noncoding RNAs that may play a role in psychiatric
The Long Noncoding RNA Landscape in - The Lancet
by T Tian 2018 Cited by 16 We profiled their amygdala whole transcriptomes with ~100 millions of 100 nt short reads per sample on average. To our knowledge, this is the
The leukocyte non-coding RNA landscape in - Combacte
Knowledge of the non-coding RNA landscape in patients with sepsis is limited. encompassing protein-coding RNA reflecting distinct cellular biological.
The role of long non-coding RNAs in cardiac - AIMS Press
by C García-Padilla Cited by 10 MiRNAs have an average size of 20 22 nucleotides and act by binding lncRNAs can modulate the epigenetic landscape of the cell acting as.
Review Article The Emerging Functions of Long Noncoding
by KR Sigdel 2015 Cited by 103 class of long noncoding RNAs (lncRNAs) with length longer implicated in the regulation of cellular differentiation .
Long non-coding RNA DSCAM-AS1 indicates a poor
by Y LI 2019 Cited by 12 revealed that long noncoding RNAs (lncRNAs) play a crucial role in tumor progression. Ovari- that DSCAM-AS1 can promote cell migration, in-.
The tissue-specific transcriptomic landscape of the mid
by M Werber 2014 Cited by 35 the gene regulatory networks controlling cellular differentiation requires addition, we have identified 1403 novel putative long noncoding RNA.
The leukocyte non-coding RNA landscape in critically - eLife
by BP Scicluna 2020 Cited by 1 Transcripts with reduced expression were predominantly associ- ated with T helper cell activation, antigen presentation, and B cell responses.